Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1927: 10295 - K19691 NIK1, TCSC osomolarity two-component system, sensor histidine kinase NIK1, at 528400 to 533209 10295 mRNA_1928: 10296 - Hypothetical Protein, at 534297 to 534878 10296 mRNA_1929: 10297 - K07880 RAB4B Ras-related protein Rab-4B, at 535979 to 537358 10297 mRNA_1930: 10298 - KOG1634 Predicted transcription factor DATF1, contains PHD and TFS2M domains, at 537705 to 541731 10298 mRNA_1931: 10299 - KOG2112 Lysophospholipase, at 542776 to 544439 10299
Group Condition mRNA_1927 mRNA_1928 mRNA_1929 mRNA_1930 mRNA_1931
10295
10296
10297
10298
10299
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 0.1 -1.0   -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.7 0.0 -0.3   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.0 0.2   -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.3 -0.4   -0.3
growth on ricinoleic acid YNB Glucose -0.3 -0.1 0.4   -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 0.4   -0.8
auxotrophy Dropout Complete -0.3 -0.4 0.7   -0.5
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 0.1   -0.1
growth on oleic acid YNB Glucose -0.3 -0.3 0.3   0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.4 0.4   -0.1
auxotrophy YNB Glucose -0.4 -0.5 0.7   0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.0   0.0
growth on ypd YPD -0.1 0.2 -0.2   -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1 0.3   -0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.1 0.3   -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.3 0.6   0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.4 0.9   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.3 0.3   -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.3 -0.6   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2 0.3   0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.0 0.3   0.1
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