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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1927: 10295 - K19691 NIK1, TCSC osomolarity two-component system, sensor histidine kinase NIK1, at 528400 to 533209
10295
mRNA_1928: 10296 - Hypothetical Protein, at 534297 to 534878
10296
mRNA_1929: 10297 - K07880 RAB4B Ras-related protein Rab-4B, at 535979 to 537358
10297
mRNA_1930: 10298 - KOG1634 Predicted transcription factor DATF1, contains PHD and TFS2M domains, at 537705 to 541731
10298
mRNA_1931: 10299 - KOG2112 Lysophospholipase, at 542776 to 544439
10299
Group
Condition
mRNA_1927
mRNA_1928
mRNA_1929
mRNA_1930
mRNA_1931
10295
10296
10297
10298
10299
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
0.1
-1.0
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.7
0.0
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.0
0.2
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.3
-0.4
-0.3
growth on ricinoleic acid
YNB Glucose
-0.3
-0.1
0.4
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
0.4
-0.8
auxotrophy
Dropout Complete
-0.3
-0.4
0.7
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.3
0.1
-0.1
growth on oleic acid
YNB Glucose
-0.3
-0.3
0.3
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.4
0.4
-0.1
auxotrophy
YNB Glucose
-0.4
-0.5
0.7
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
0.0
0.0
growth on ypd
YPD
-0.1
0.2
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.1
0.3
-0.5
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.3
0.6
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.4
0.9
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.3
0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
0.3
-0.6
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.2
0.3
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.0
0.3
0.1
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