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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1923: 10291 - K19787 CARNMT1 carnosine N-methyltransferase, at 519459 to 521071
10291
mRNA_1924: 10292 - K00763 pncB, NAPRT1 nicotinate phosphoribosyltransferase, at 521294 to 523495
10292
mRNA_1925: 10293 - K13239 PECI peroxisomal 3,2-trans-enoyl-CoA isomerase, at 523662 to 525143
10293
mRNA_1926: 10294 - HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266, at 525365 to 527827
10294
mRNA_1927: 10295 - K19691 NIK1, TCSC osomolarity two-component system, sensor histidine kinase NIK1, at 528400 to 533209
10295
Group
Condition
mRNA_1923
mRNA_1924
mRNA_1925
mRNA_1926
mRNA_1927
10291
10292
10293
10294
10295
growth on ypd
YPD
-0.2
-0.0
-0.7
0.0
-0.1
growth on oleic acid
YNB Glucose
-0.0
0.0
-0.4
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.1
-0.1
0.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.2
0.0
0.1
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.4
0.0
0.1
-0.7
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.0
-0.1
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
-0.1
-0.4
-0.1
growth on oleic acid
YNB Oleic Acid
0.1
0.0
-0.3
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.3
-0.0
-0.2
-0.4
auxotrophy
YNB Glucose
-0.4
-0.1
0.0
0.5
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.2
-0.4
-0.1
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.2
0.1
0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.3
-0.1
0.2
-0.4
auxotrophy
Dropout Complete
0.0
0.2
-0.1
0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
0.2
0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.2
0.1
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
0.0
-0.6
0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.6
0.2
0.6
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.1
-0.0
0.7
-0.2
growth on ricinoleic acid
YNB Glucose
0.5
0.2
-0.1
0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.8
0.2
-0.3
0.3
0.2
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