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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1916: 10284 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Domain of unknown function (DUF3425)-PF11905,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 508004 to 509890
10284
mRNA_1917: 10285 - K04488 iscU, nifU nitrogen fixation protein NifU and related proteins, at 510192 to 511246
10285
mRNA_1918: 10286 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 512631 to 512981
10286
mRNA_1919: 10287 - K11340 ACTL6A, INO80K actin-like protein 6A, at 513454 to 515296
10287
mRNA_1920: 10288 - Hypothetical Protein, at 515602 to 517203
10288
Group
Condition
mRNA_1916
mRNA_1917
mRNA_1918
mRNA_1919
mRNA_1920
10284
10285
10286
10287
10288
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.5
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.8
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
0.4
growth on ricinoleic acid
YNB Glucose
-0.3
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.2
growth on ypd
YPD
0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.1
auxotrophy
YNB Glucose
0.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.8
-0.7
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.2
auxotrophy
Dropout Complete
0.5
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.6
0.1
growth on oleic acid
YNB Glucose
0.3
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.9
0.9
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