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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1912: 10280 - K04450 ATF2, CREBP1 cyclic AMP-dependent transcription factor ATF-2, at 500203 to 502614
10280
mRNA_1913: 10281 - K04564 SOD2 superoxide dismutase, Fe-Mn family, at 503193 to 504426
10281
mRNA_1914: 10282 - K07942 ARL1 ADP-ribosylation factor-like protein 1, at 504736 to 505677
10282
mRNA_1915: 10283 - K03063 PSMC4, RPT3 26S proteasome regulatory subunit T3, at 506230 to 507925
10283
mRNA_1916: 10284 - HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Domain of unknown function (DUF3425)-PF11905,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 508004 to 509890
10284
Group
Condition
mRNA_1912
mRNA_1913
mRNA_1914
mRNA_1915
mRNA_1916
10280
10281
10282
10283
10284
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-0.3
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-1.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.4
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.8
-1.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.5
0.0
growth on ricinoleic acid
YNB Glucose
0.4
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.2
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.0
0.6
growth on oleic acid
YNB Oleic Acid
0.5
0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.0
0.8
-0.8
growth on ypd
YPD
0.2
0.4
0.3
growth on oleic acid
YNB Glucose
0.7
-0.0
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
0.7
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.8
0.5
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.5
0.9
auxotrophy
YNB Glucose
1.1
0.7
0.3
auxotrophy
YNB Glucose 75mM Methionine
1.2
0.2
0.8
auxotrophy
Dropout Complete
0.9
0.7
0.5
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