Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1911: 10279 - K14967 BRE2, CPS60 COMPASS component BRE2, at 497993 to 499871 10279 mRNA_1912: 10280 - K04450 ATF2, CREBP1 cyclic AMP-dependent transcription factor ATF-2, at 500203 to 502614 10280 mRNA_1913: 10281 - K04564 SOD2 superoxide dismutase, Fe-Mn family, at 503193 to 504426 10281 mRNA_1914: 10282 - K07942 ARL1 ADP-ribosylation factor-like protein 1, at 504736 to 505677 10282 mRNA_1915: 10283 - K03063 PSMC4, RPT3 26S proteasome regulatory subunit T3, at 506230 to 507925 10283
Group Condition mRNA_1911 mRNA_1912 mRNA_1913 mRNA_1914 mRNA_1915
10279
10280
10281
10282
10283
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 -0.0   -1.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.1 0.1   -0.2  
facs on lipid accumulation Sorted No BODIPY Gate -1.1 0.2   -0.4  
facs on lipid accumulation Sorted High BODIPY Gate -0.9 0.1   -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.8   -0.3  
ypd buoyancy 40 hrs High Buoyancy -0.4 0.1   -0.2  
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.4   0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 0.4   0.7  
growth on ypd YPD -0.3 0.2   0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.0   0.0  
growth on ricinoleic acid YNB Glucose -0.0 0.4   0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.2   0.1  
growth on oleic acid YNB Glucose 0.0 0.7   -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.3   0.5  
growth on oleic acid YNB Oleic Acid 0.7 0.5   0.4  
auxotrophy YNB Glucose 75mM Methionine 0.4 1.2   0.2  
auxotrophy YNB Glucose 75mM Arginine 0.5 0.8   0.5  
auxotrophy YNB Glucose 0.2 1.1   0.7  
auxotrophy Dropout Complete 0.4 0.9   0.7  
growth on ricinoleic acid YNB Ricinoleic Acid 1.3 0.3   0.8  
growth on ricinoleic acid YNB Methylricinoleic Acid 1.2 1.0   0.8  
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