Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1908: 10276 - K01426 E3.5.1.4, amiE amidase, at 490535 to 492598 10276 mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493180 to 495383 10277 mRNA_1910: 10278 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 495564 to 497825 10278 mRNA_1911: 10279 - K14967 BRE2, CPS60 COMPASS component BRE2, at 497993 to 499871 10279 mRNA_1912: 10280 - K04450 ATF2, CREBP1 cyclic AMP-dependent transcription factor ATF-2, at 500203 to 502614 10280
Group Condition mRNA_1908 mRNA_1909 mRNA_1910 mRNA_1911 mRNA_1912
10276
10277
10278
10279
10280
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.1 0.1 -2.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.4 -0.4 -1.9 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 0.0 -0.0 -1.0 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.3 -0.1 -0.9 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.5 -0.3 -1.1 0.2
growth on ricinoleic acid YNB Glucose -0.0 -0.5 -0.2 -0.0 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.4 0.1 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 -0.1 0.4 0.2
ypd buoyancy 40 hrs High Buoyancy 0.1 0.0 0.0 -0.4 0.1
growth on oleic acid YNB Glucose -0.7 0.2 -0.1 0.0 0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 0.0 -0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.6 0.1 -0.1 -0.8
growth on oleic acid YNB Oleic Acid -0.6 -0.1 -0.1 0.7 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 -0.2 0.3 0.0
growth on ypd YPD 0.1 0.6 0.3 -0.3 0.2
auxotrophy YNB Glucose -0.1 -0.3 0.1 0.2 1.1
auxotrophy Dropout Complete -0.2 -0.1 0.0 0.4 0.9
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 -0.0 0.4 1.2
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.2 0.0 0.5 0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.4 1.2 1.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.3 -0.1 1.3 0.3
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