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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1907: 10275 - Hypothetical Protein, at 487882 to 489189
10275
mRNA_1908: 10276 - K01426 E3.5.1.4, amiE amidase, at 490535 to 492598
10276
mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493180 to 495383
10277
mRNA_1910: 10278 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 495564 to 497825
10278
mRNA_1911: 10279 - K14967 BRE2, CPS60 COMPASS component BRE2, at 497993 to 499871
10279
Group
Condition
mRNA_1907
mRNA_1908
mRNA_1909
mRNA_1910
mRNA_1911
10275
10276
10277
10278
10279
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.1
0.1
-2.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.4
-0.4
-1.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
0.0
-0.0
-1.0
growth on ricinoleic acid
YNB Glucose
-0.0
-0.5
-0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.5
-0.3
-1.1
growth on oleic acid
YNB Glucose
-0.7
0.2
-0.1
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.3
-0.1
-0.9
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.1
-0.1
0.4
ypd buoyancy
40 hrs High Buoyancy
0.1
0.0
0.0
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.1
0.0
-0.1
auxotrophy
YNB Glucose
-0.1
-0.3
0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.2
-0.0
0.4
growth on oleic acid
YNB Oleic Acid
-0.6
-0.1
-0.1
0.7
auxotrophy
Dropout Complete
-0.2
-0.1
0.0
0.4
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.4
0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.2
-0.4
1.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.2
0.0
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
-0.2
0.3
growth on ypd
YPD
0.1
0.6
0.3
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
0.6
0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.3
-0.1
1.3
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