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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1906: 10274 - KOG0627 Heat shock transcription factor, at 483012 to 484134
10274
mRNA_1907: 10275 - Hypothetical Protein, at 487882 to 489189
10275
mRNA_1908: 10276 - K01426 E3.5.1.4, amiE amidase, at 490535 to 492598
10276
mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493180 to 495383
10277
mRNA_1910: 10278 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 495564 to 497825
10278
Group
Condition
mRNA_1906
mRNA_1907
mRNA_1908
mRNA_1909
mRNA_1910
10274
10275
10276
10277
10278
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.7
-0.3
-0.2
-0.4
growth on oleic acid
YNB Oleic Acid
-2.0
-0.6
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.6
0.2
-0.3
-0.1
growth on oleic acid
YNB Glucose
-2.0
-0.7
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-2.0
-0.5
-0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
-1.7
-0.3
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
-1.4
-0.0
-0.5
-0.2
auxotrophy
Dropout Complete
-1.6
-0.2
-0.1
0.0
ypd buoyancy
40 hrs Low Buoyancy
-2.4
0.0
0.4
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.7
0.1
0.4
-0.4
auxotrophy
YNB Glucose
-1.3
-0.1
-0.3
0.1
auxotrophy
YNB Glucose 75mM Arginine
-1.3
0.1
-0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
-1.0
0.1
0.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.6
0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.5
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.6
0.2
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
0.2
0.5
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.1
0.3
-0.1
growth on ypd
YPD
-0.5
0.1
0.6
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
0.5
0.6
0.1
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