Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1900: 10268 - K15071 RCY1, POF6 recyclin-1, at 464695 to 468117 10268 mRNA_1901: 10269 - HMMPfam-Spo7-like protein-PF03907, at 468442 to 470059 10269 mRNA_1902: 10270 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 470180 to 472538 10270 mRNA_1903: 10271 - HMMPfam-Sfi1 spindle body protein-PF08457, at 474303 to 478311 10271 mRNA_1904: 10272 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SMART-Serine/Threonine protein kinases, catalytic domain-SM00220,SUPERFAMILY--SSF56112, at 479057 to 480594 10272
Group Condition mRNA_1900 mRNA_1901 mRNA_1902 mRNA_1903 mRNA_1904
10268
10269
10270
10271
10272
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 -1.4 -0.9   -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -1.9 0.4   -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.6 0.1   -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.3 -0.3   0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 0.1   -0.4
auxotrophy Dropout Complete -0.1 -0.5 -0.0   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.3 -0.5   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0 -0.7 -0.3   -0.4
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.5 0.2   -0.2
growth on ricinoleic acid YNB Glucose 0.6 -0.6 0.1   -0.4
auxotrophy YNB Glucose 0.4 -0.4 -0.1   -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 0.3   -0.1
growth on oleic acid YNB Oleic Acid -0.1 0.0 0.0   -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.5 -0.1   0.0
growth on ypd YPD 0.0 0.3 0.1   -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.2 0.3   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.9 -0.2 -0.2   -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 0.6 0.6   0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 0.9 -0.4   -0.3
growth on oleic acid YNB Glucose -0.1 0.3 0.3   0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.4 0.1   0.1
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