Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1893: 10261 - HMMPfam-Amidohydrolase-PF04909,SUPERFAMILY--SSF51556, at 448641 to 450220 10261 mRNA_1894: 10262 - K01253 EPHX1 microsomal epoxide hydrolase, at 450582 to 452258 10262 mRNA_1895: 10263 - K09247 CYP1, HAP1 heme activator protein 1, at 452374 to 455740 10263 mRNA_1896: 10264 - K00844 HK hexokinase, at 456239 to 458071 10264 mRNA_1897: 10265 - K07443 ybaZ methylated-DNA-protein-cysteine methyltransferase related protein, at 458444 to 459156 10265
Group Condition mRNA_1893 mRNA_1894 mRNA_1895 mRNA_1896 mRNA_1897
10261
10262
10263
10264
10265
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.5 0.1 -3.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.4 -0.6 -1.6 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 0.1 -2.1 -0.0
growth on ricinoleic acid YNB Glucose 0.1 0.1 -0.4 -2.0 -0.0
auxotrophy YNB Glucose -0.2 -0.2 -0.6 -1.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 0.1 -1.6 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 -0.5 -0.6 0.3
growth on oleic acid YNB Glucose 0.3 0.0 -0.7 -0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.2 -0.6 -0.4 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 -0.6 -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.0 -0.6 -1.0 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.3 -0.1 -0.1
auxotrophy Dropout Complete -0.1 -0.1 -0.4 0.4 -0.1
growth on ypd YPD 0.1 0.2 -0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.0 -0.5 0.5 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.1 -0.1 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.4 -0.3 0.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 0.3 0.1 0.5
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 -0.1 0.5 0.2
growth on oleic acid YNB Oleic Acid 0.2 0.4 -0.1 1.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.6 0.1 0.9 0.1
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