Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1891: 10259 - K03083 GSK3B glycogen synthase kinase 3 beta, at 443414 to 444929 10259 mRNA_1892: 10260 - K15743 CES3_5 carboxylesterase 3/5, at 445526 to 447987 10260 mRNA_1893: 10261 - HMMPfam-Amidohydrolase-PF04909,SUPERFAMILY--SSF51556, at 448641 to 450220 10261 mRNA_1894: 10262 - K01253 EPHX1 microsomal epoxide hydrolase, at 450582 to 452258 10262 mRNA_1895: 10263 - K09247 CYP1, HAP1 heme activator protein 1, at 452374 to 455740 10263
Group Condition mRNA_1891 mRNA_1892 mRNA_1893 mRNA_1894 mRNA_1895
10259
10260
10261
10262
10263
facs on lipid accumulation Sorted High BODIPY Gate -3.3 -0.1 0.1 -0.4 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -3.1 0.3 0.3 0.1 -0.1
growth on oleic acid YNB Oleic Acid -2.6 -0.3 0.2 0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.2 -0.3 0.4 0.6 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.0 -0.0 0.2 0.1 -0.6
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.7 -0.2 -0.3 -0.5
growth on oleic acid YNB Glucose -0.3 -0.3 0.3 0.0 -0.7
auxotrophy YNB Glucose 0.1 -0.0 -0.2 -0.2 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 0.4 0.0 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.3 -0.2 -0.3 0.1
auxotrophy Dropout Complete 0.4 -0.3 -0.1 -0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 -0.1 0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.8 -0.3 0.0 -0.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.0 -0.0 -0.5 0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.1 0.1 0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 -0.1 -0.0 -0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.2 -0.1 -0.2 0.3
growth on ypd YPD 0.6 0.1 0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.1 -0.2 -0.1 -0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.5 -0.0 0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 2.2 -0.1 0.0 0.0 -0.5
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