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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1886: 10254 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 436589 to 438730
10254
mRNA_1887: 10255 - K14823 EBP2, EBNA1BP2 rRNA-processing protein EBP2, at 439280 to 440428
10255
mRNA_1888: 10256 - HMMPfam-Protein of unknown function (DUF2423)-PF10338, at 441171 to 441971
10256
mRNA_1889: 10257 - Hypothetical Protein, at 442061 to 442321
10257
mRNA_1890: 10258 - Hypothetical Protein, at 442391 to 442819
10258
Group
Condition
mRNA_1886
mRNA_1887
mRNA_1888
mRNA_1889
mRNA_1890
10254
10255
10256
10257
10258
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-1.9
-0.4
-0.3
growth on ypd
YPD
0.2
-0.8
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.9
0.1
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.3
-0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.3
0.1
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.2
-0.0
0.8
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.4
-0.1
0.3
auxotrophy
Dropout Complete
0.0
1.0
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
1.2
-0.0
-0.8
ypd buoyancy
40 hrs High Buoyancy
0.2
0.0
-0.1
0.5
growth on oleic acid
YNB Oleic Acid
-0.1
0.7
0.1
0.2
growth on oleic acid
YNB Glucose
0.1
0.8
0.1
0.1
auxotrophy
YNB Glucose
0.5
0.8
-0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
1.4
0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.6
0.2
0.7
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.7
0.0
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.9
-0.0
0.7
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.7
0.1
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
1.7
0.3
-0.3
growth on ricinoleic acid
YNB Glucose
0.1
1.4
0.1
0.1
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