Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1882: 10250 - HMMPfam-S4 domain-PF01479,ProSitePatterns-Ribosomal protein S4 signature.-PS00632,ProSiteProfiles-S4 RNA-binding domain profile.-PS50889,SMART-S4 RNA-binding domain-SM00363,SUPERFAMILY--SSF55174, at 428761 to 429844 10250 mRNA_1883: 10251 - KOG2665 Predicted FAD-dependent oxidoreductase, at 430168 to 431962 10251 mRNA_1884: 10252 - Hypothetical Protein, at 432578 to 433282 10252 mRNA_1885: 10253 - KOG1238 Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family), at 433544 to 436141 10253 mRNA_1886: 10254 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 436589 to 438730 10254
Group Condition mRNA_1882 mRNA_1883 mRNA_1884 mRNA_1885 mRNA_1886
10250
10251
10252
10253
10254
growth on ypd YPD   -0.1 -0.7 -0.4 0.2
auxotrophy Dropout Complete   -0.4 -0.4 -0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.0 0.2 -0.5 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0 -0.3 0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 -0.6 0.2 0.0
growth on oleic acid YNB Oleic Acid   -0.0 0.1 -0.2 -0.1
growth on ricinoleic acid YNB Glucose   -0.0 -0.2 -0.0 0.1
auxotrophy YNB Glucose 75mM Methionine   -0.2 -0.0 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.3 -0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate   0.0 0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 -0.0 0.1 -0.1
growth on oleic acid YNB Glucose   0.0 -0.0 -0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 0.4 -0.1 -0.4
auxotrophy YNB Glucose   0.1 -0.0 -0.3 0.5
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -0.0 0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy   0.3 -0.2 0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate   0.0 -0.0 0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 0.3 0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy   0.3 -0.0 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy   0.6 0.1 -0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation   0.5 -0.0 0.2 0.3
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