Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1871: 10239 - K14855 RSA4, NLE1 ribosome assembly protein 4, at 407656 to 409995 10239 mRNA_1872: 10240 - K14566 UTP24, FCF1 U3 small nucleolar RNA-associated protein 24, at 410238 to 411340 10240 mRNA_1873: 10241 - BLAST Rab geranylgeranyltransferase [Mycena chlorophos], at 411554 to 414002 10241 mRNA_1874: 10242 - BLAST midasin [Pseudozyma hubeiensis SY62], at 414154 to 415207 10242 mRNA_1875: 10243 - Hypothetical Protein, at 415484 to 416261 10243
Group Condition mRNA_1871 mRNA_1872 mRNA_1873 mRNA_1874 mRNA_1875
10239
10240
10241
10242
10243
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -1.0 -0.4  
growth on ypd YPD     -0.1 -0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.3 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.2 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate     0.2 -0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.3 0.0  
ypd buoyancy 40 hrs High Buoyancy     -0.1 -0.1  
growth on oleic acid YNB Oleic Acid     0.3 -0.5  
auxotrophy YNB Glucose     0.5 -0.5  
facs on lipid accumulation Sorted High BODIPY Gate     -0.1 0.0  
auxotrophy YNB Glucose 75mM Arginine     0.4 -0.4  
auxotrophy YNB Glucose 75mM Methionine     0.2 -0.3  
auxotrophy Dropout Complete     0.4 -0.4  
growth on ricinoleic acid YNB Glucose     0.4 -0.2  
ypd buoyancy 40 hrs Median Buoyancy     0.1 0.1  
facs on lipid accumulation Sorted No BODIPY Gate     -0.3 0.5  
growth on oleic acid YNB Glucose     0.3 -0.1  
ypd buoyancy 40 hrs Low Buoyancy     0.5 0.1  
ypd buoyancy 40 hrs No Buoyancy Separation     0.2 0.6  
growth on ricinoleic acid YNB Ricinoleic Acid     1.0 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid     1.3 0.1  
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