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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1870: 10238 - K18043 OCA1 tyrosine-protein phosphatase OCA1, at 406751 to 407606
10238
mRNA_1871: 10239 - K14855 RSA4, NLE1 ribosome assembly protein 4, at 407656 to 409995
10239
mRNA_1872: 10240 - K14566 UTP24, FCF1 U3 small nucleolar RNA-associated protein 24, at 410238 to 411340
10240
mRNA_1873: 10241 - BLAST Rab geranylgeranyltransferase [Mycena chlorophos], at 411554 to 414002
10241
mRNA_1874: 10242 - BLAST midasin [Pseudozyma hubeiensis SY62], at 414154 to 415207
10242
Group
Condition
mRNA_1870
mRNA_1871
mRNA_1872
mRNA_1873
mRNA_1874
10238
10239
10240
10241
10242
ypd buoyancy
40 hrs No Buoyancy Separation
-2.6
0.2
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-1.0
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
0.2
-0.4
auxotrophy
YNB Glucose
-0.5
0.5
-0.5
growth on oleic acid
YNB Oleic Acid
-0.4
0.3
-0.5
auxotrophy
Dropout Complete
-0.6
0.4
-0.4
growth on ypd
YPD
0.1
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.3
0.5
growth on ricinoleic acid
YNB Glucose
0.3
0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.7
-0.3
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.4
0.1
0.1
growth on oleic acid
YNB Glucose
0.5
0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.2
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.5
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
1.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
1.3
0.1
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