Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1869: 10237 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 404642 to 406231 10237 mRNA_1870: 10238 - K18043 OCA1 tyrosine-protein phosphatase OCA1, at 406751 to 407606 10238 mRNA_1871: 10239 - K14855 RSA4, NLE1 ribosome assembly protein 4, at 407656 to 409995 10239 mRNA_1872: 10240 - K14566 UTP24, FCF1 U3 small nucleolar RNA-associated protein 24, at 410238 to 411340 10240 mRNA_1873: 10241 - BLAST Rab geranylgeranyltransferase [Mycena chlorophos], at 411554 to 414002 10241
Group Condition mRNA_1869 mRNA_1870 mRNA_1871 mRNA_1872 mRNA_1873
10237
10238
10239
10240
10241
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -2.6     0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -0.6     0.2
auxotrophy Dropout Complete -0.4 -0.6     0.4
ypd buoyancy 40 hrs High Buoyancy -0.5 0.2     -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.5     -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1     -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.2     -0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.4     0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.4     -0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.4     0.3
growth on ypd YPD 0.4 0.1     -0.1
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.1     0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.4     0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.7     -0.3
auxotrophy YNB Glucose 0.5 -0.5     0.5
growth on ricinoleic acid YNB Glucose -0.1 0.3     0.4
growth on oleic acid YNB Glucose -0.2 0.5     0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 1.2     -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.3     0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1     1.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2     1.0
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