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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1867: 10235 - HMMPfam-von Willebrand factor type A domain-PF00092,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 402517 to 403659
10235
mRNA_1868: 10236 - K11569 DAD4, HSK2 DASH complex subunit DAD4, at 403783 to 404255
10236
mRNA_1869: 10237 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 404642 to 406231
10237
mRNA_1870: 10238 - K18043 OCA1 tyrosine-protein phosphatase OCA1, at 406751 to 407606
10238
mRNA_1871: 10239 - K14855 RSA4, NLE1 ribosome assembly protein 4, at 407656 to 409995
10239
Group
Condition
mRNA_1867
mRNA_1868
mRNA_1869
mRNA_1870
mRNA_1871
10235
10236
10237
10238
10239
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.5
-2.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.8
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
-0.1
auxotrophy
Dropout Complete
0.2
-0.4
-0.6
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.9
0.1
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.5
0.2
auxotrophy
YNB Glucose
-0.3
0.5
-0.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.2
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.2
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.0
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
0.2
growth on ypd
YPD
0.2
0.4
0.1
growth on oleic acid
YNB Glucose
0.4
-0.2
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.1
0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
-0.0
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.2
1.2
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