Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1867: 10235 - HMMPfam-von Willebrand factor type A domain-PF00092,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 402517 to 403659 10235 mRNA_1868: 10236 - K11569 DAD4, HSK2 DASH complex subunit DAD4, at 403783 to 404255 10236 mRNA_1869: 10237 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 404642 to 406231 10237 mRNA_1870: 10238 - K18043 OCA1 tyrosine-protein phosphatase OCA1, at 406751 to 407606 10238 mRNA_1871: 10239 - K14855 RSA4, NLE1 ribosome assembly protein 4, at 407656 to 409995 10239
Group Condition mRNA_1867 mRNA_1868 mRNA_1869 mRNA_1870 mRNA_1871
10235
10236
10237
10238
10239
ypd buoyancy 40 hrs No Buoyancy Separation -0.3   -0.5 -2.6  
facs on lipid accumulation Sorted Low BODIPY Gate -0.4   -0.8 -0.6  
facs on lipid accumulation Sorted No BODIPY Gate -0.8   -0.1 0.2  
facs on lipid accumulation Sorted High BODIPY Gate -0.4   -0.1 -0.1  
auxotrophy Dropout Complete 0.2   -0.4 -0.6  
growth on oleic acid YNB Oleic Acid -0.2   -0.0 -0.4  
ypd buoyancy 40 hrs Low Buoyancy -0.9   0.1 0.3  
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.5 0.2  
auxotrophy YNB Glucose -0.3   0.5 -0.5  
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.0 -0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5   -0.2 0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.1 -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.4   -0.2 0.4  
auxotrophy YNB Glucose 75mM Arginine 0.0   0.0 -0.1  
growth on ricinoleic acid YNB Glucose -0.2   -0.1 0.3  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2   0.1 0.2  
growth on ypd YPD 0.2   0.4 0.1  
growth on oleic acid YNB Glucose 0.4   -0.2 0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   0.1 0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5   -0.0 0.7  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2   -0.2 1.2  
remove
mRNA_1867
plot
remove
mRNA_1868
plot
remove
mRNA_1869
remove
mRNA_1870
plot
remove
mRNA_1871
plot