Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1866: 10234 - KOG4455 Uncharacterized conserved protein, at 401287 to 402071 10234 mRNA_1867: 10235 - HMMPfam-von Willebrand factor type A domain-PF00092,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 402517 to 403659 10235 mRNA_1868: 10236 - K11569 DAD4, HSK2 DASH complex subunit DAD4, at 403783 to 404255 10236 mRNA_1869: 10237 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 404642 to 406231 10237 mRNA_1870: 10238 - K18043 OCA1 tyrosine-protein phosphatase OCA1, at 406751 to 407606 10238
Group Condition mRNA_1866 mRNA_1867 mRNA_1868 mRNA_1869 mRNA_1870
10234
10235
10236
10237
10238
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.3   -0.5 -2.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 -0.4   -0.8 -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.8   -0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.0   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.5   -0.2 0.4
growth on ricinoleic acid YNB Glucose -0.5 -0.2   -0.1 0.3
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1   -0.5 0.2
auxotrophy Dropout Complete 0.4 0.2   -0.4 -0.6
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.9   0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.6 -0.4   -0.1 -0.1
growth on oleic acid YNB Oleic Acid 0.6 -0.2   -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.4   -0.2 0.4
auxotrophy YNB Glucose 0.5 -0.3   0.5 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 0.3   0.1 0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.2   0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.8 0.1   -0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.5 0.0   0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 0.2   -0.2 1.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.5   -0.0 0.7
growth on ypd YPD 0.4 0.2   0.4 0.1
growth on oleic acid YNB Glucose 0.4 0.4   -0.2 0.5
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