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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1862: 10230 - Interpro DNA replication factor Cdt1 C-terminal domain 0, at 394402 to 396759
10230
mRNA_1863: 10231 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 396893 to 397973
10231
mRNA_1864: 10232 - SUPERFAMILY--SSF53300, at 398356 to 399523
10232
mRNA_1865: 10233 - K02729 PSMA5 20S proteasome subunit alpha 5, at 399738 to 401124
10233
mRNA_1866: 10234 - KOG4455 Uncharacterized conserved protein, at 401287 to 402071
10234
Group
Condition
mRNA_1862
mRNA_1863
mRNA_1864
mRNA_1865
mRNA_1866
10230
10231
10232
10233
10234
growth on ricinoleic acid
YNB Glucose
0.0
-0.0
-1.5
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.6
-1.4
-0.2
growth on ypd
YPD
-0.0
-0.2
-1.9
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.1
-1.4
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.8
0.1
-0.7
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.0
-0.9
0.3
growth on oleic acid
YNB Glucose
-0.4
-0.1
-0.6
0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.6
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
-0.7
0.8
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.2
-0.2
0.0
auxotrophy
YNB Glucose
-0.1
-0.3
-0.4
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-1.0
1.3
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
-0.2
0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.0
0.3
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.1
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
-0.3
0.9
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.1
-0.1
0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.5
0.7
0.6
auxotrophy
Dropout Complete
-0.1
0.2
0.2
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.4
1.7
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.6
1.8
-0.3
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