Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1860: 10228 - K02259 COX15 cytochrome c oxidase assembly protein subunit 15, at 391370 to 393300 10228 mRNA_1861: 10229 - KOG3348 BolA (bacterial stress-induced morphogen)-related protein, at 393442 to 393978 10229 mRNA_1862: 10230 - Interpro DNA replication factor Cdt1 C-terminal domain 0, at 394402 to 396759 10230 mRNA_1863: 10231 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 396893 to 397973 10231 mRNA_1864: 10232 - SUPERFAMILY--SSF53300, at 398356 to 399523 10232
Group Condition mRNA_1860 mRNA_1861 mRNA_1862 mRNA_1863 mRNA_1864
10228
10229
10230
10231
10232
growth on ypd YPD     -0.0 -0.2 -1.9
growth on ricinoleic acid YNB Ricinoleic Acid     0.3 -0.6 -1.4
growth on ricinoleic acid YNB Glucose     0.0 -0.0 -1.5
growth on ricinoleic acid YNB Methylricinoleic Acid     0.3 -0.1 -1.4
auxotrophy YNB Glucose 75mM Methionine     -0.2 -0.2 -0.7
growth on oleic acid YNB Glucose     -0.4 -0.1 -0.6
ypd buoyancy 40 hrs Low Buoyancy     0.0 -0.0 -0.9
ypd buoyancy 40 hrs Median Buoyancy     -0.1 -0.1 -0.6
auxotrophy YNB Glucose     -0.1 -0.3 -0.4
growth on oleic acid YNB Oleic Acid     -0.2 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.2 -0.8 0.1
ypd buoyancy 40 hrs High Buoyancy     0.1 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate     -0.3 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine     -0.5 -0.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate     -0.2 -0.5 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.2 -1.0 1.3
facs on lipid accumulation Sorted No BODIPY Gate     0.1 0.1 0.1
auxotrophy Dropout Complete     -0.1 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation     0.7 -0.3 0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.2 -0.6 1.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.1 -0.4 1.7
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