Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1859: 10227 - SUPERFAMILY--SSF57997, at 388857 to 391098 10227 mRNA_1860: 10228 - K02259 COX15 cytochrome c oxidase assembly protein subunit 15, at 391370 to 393300 10228 mRNA_1861: 10229 - KOG3348 BolA (bacterial stress-induced morphogen)-related protein, at 393442 to 393978 10229 mRNA_1862: 10230 - Interpro DNA replication factor Cdt1 C-terminal domain 0, at 394402 to 396759 10230 mRNA_1863: 10231 - HMMPfam-Metallo-beta-lactamase superfamily-PF00753,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281, at 396893 to 397973 10231
Group Condition mRNA_1859 mRNA_1860 mRNA_1861 mRNA_1862 mRNA_1863
10227
10228
10229
10230
10231
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1     -0.2 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0     -0.2 -0.5
growth on oleic acid YNB Oleic Acid -0.1     -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.0     -0.5 -0.0
auxotrophy YNB Glucose -0.2     -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.4     0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.0     -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2     -0.1 -0.1
growth on oleic acid YNB Glucose 0.2     -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2     0.2 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.0     -0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     0.3 -0.6
growth on ypd YPD 0.1     -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4     0.2 -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1     0.1 -0.4
auxotrophy Dropout Complete -0.2     -0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0     0.0 -0.0
growth on ricinoleic acid YNB Glucose 0.0     0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3     0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.2     0.7 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.3     0.1 0.1
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