Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1857: 10225 - KOG2533 Permease of the major facilitator superfamily, at 383950 to 386547 10225 mRNA_1858: 10226 - K19245 JLP1 sulfonate dioxygenase, at 387260 to 388608 10226 mRNA_1859: 10227 - SUPERFAMILY--SSF57997, at 388857 to 391098 10227 mRNA_1860: 10228 - K02259 COX15 cytochrome c oxidase assembly protein subunit 15, at 391370 to 393300 10228 mRNA_1861: 10229 - KOG3348 BolA (bacterial stress-induced morphogen)-related protein, at 393442 to 393978 10229
Group Condition mRNA_1857 mRNA_1858 mRNA_1859 mRNA_1860 mRNA_1861
10225
10226
10227
10228
10229
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.9 0.0    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.2 -0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2 0.1    
growth on ypd YPD -0.4 0.1 0.1    
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.2 -0.0    
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2 -0.4    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.0 0.2    
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.3 -0.2    
growth on oleic acid YNB Oleic Acid 0.0 0.1 -0.1    
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -0.7 0.1    
growth on oleic acid YNB Glucose 0.1 -0.2 0.2    
auxotrophy Dropout Complete -0.1 0.3 -0.2    
auxotrophy YNB Glucose 75mM Arginine -0.2 0.4 -0.0    
auxotrophy YNB Glucose -0.2 0.5 -0.2    
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.2 0.3    
auxotrophy YNB Glucose 75mM Methionine -0.1 0.3 0.0    
growth on ricinoleic acid YNB Glucose 0.5 -0.2 0.0    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 0.4    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.1 0.3    
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.5 0.0    
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.5 0.2    
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