Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1846: 10214 - KOG2458 Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif, at 357162 to 359735 10214 mRNA_1847: 10215 - BLAST GDP-fucose protein O-fucosyltransferase [Rhizopogon v..., at 360311 to 362309 10215 mRNA_1848: 10216 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 362950 to 364987 10216 mRNA_1849: 10217 - Hypothetical Protein, at 365239 to 367490 10217 mRNA_1850: 10218 - K00311 ETFDH electron-transferring-flavoprotein dehydrogenase, at 368575 to 371026 10218
Group Condition mRNA_1846 mRNA_1847 mRNA_1848 mRNA_1849 mRNA_1850
10214
10215
10216
10217
10218
growth on ricinoleic acid YNB Ricinoleic Acid 0.9 0.1 -0.1 -0.0 -3.7
growth on oleic acid YNB Oleic Acid -0.0 -0.2 0.1 -0.1 -2.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.9 0.2 -0.1 -0.1 -2.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 0.0 0.1 -1.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.3 0.1 -0.3 -0.3
growth on oleic acid YNB Glucose -0.0 -0.0 0.0 -0.0 -0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.1 -0.3 0.0 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.0 -0.1 0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.5 0.3 -0.2 0.2 -1.0
auxotrophy YNB Glucose 0.5 0.1 -0.1 -0.0 -0.6
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.0 0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.5 0.0 -0.2 0.0 -0.5
growth on ypd YPD 0.0 0.2 -0.2 -0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.0 -0.1 -0.0 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 0.0 0.5 0.1 -1.2
auxotrophy YNB Glucose 75mM Arginine 0.6 0.1 -0.2 0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 -0.1 -0.3 0.1 -0.1
auxotrophy Dropout Complete 0.4 0.0 -0.2 0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 0.1 -0.1 0.5
growth on ricinoleic acid YNB Glucose 0.9 0.1 0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.1 0.1 0.4 -0.2
remove
mRNA_1846
plot		 remove
mRNA_1847
plot		 remove
mRNA_1848		 remove
mRNA_1849
plot		 remove
mRNA_1850
plot