Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501 10203 mRNA_1836: 10204 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729, at 329163 to 331495 10204 mRNA_1837: 10205 - K00281 GLDC, gcvP glycine dehydrogenase, at 331991 to 335971 10205 mRNA_1838: 10206 - K04486 E3.1.3.15B histidinol-phosphatase (PHP family), at 336405 to 337627 10206 mRNA_1839: 10207 - Hypothetical Protein, at 337728 to 339625 10207
Group Condition mRNA_1835 mRNA_1836 mRNA_1837 mRNA_1838 mRNA_1839
10203
10204
10205
10206
10207
growth on ricinoleic acid YNB Ricinoleic Acid -1.7 -0.3 -1.1   0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 -0.2 -0.9   -0.1
auxotrophy YNB Glucose -1.0 -0.4 -0.1   -0.3
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.0 -0.7   0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 0.3 -0.8   -0.2
growth on ricinoleic acid YNB Glucose -1.0 -0.2 -0.1   -0.1
auxotrophy Dropout Complete -0.9 -0.0 0.2   -0.4
auxotrophy YNB Glucose 75mM Arginine -1.1 -0.0 0.2   -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.9   0.1
growth on oleic acid YNB Glucose -1.0 -0.1 0.1   -0.1
auxotrophy YNB Glucose 75mM Methionine -0.9 -0.3 0.3   -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 -0.4   0.0
growth on oleic acid YNB Oleic Acid -0.7 -0.0 -0.2   0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.8   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.5 -0.5   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -0.2 0.2   0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 -0.2   -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.2   0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.1 -0.4   0.3
growth on ypd YPD 0.3 0.2 0.1   -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.5 -0.2 0.1   0.3
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