Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1834: 10202 - Hypothetical Protein, at 323054 to 324268 10202 mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501 10203 mRNA_1836: 10204 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729, at 329163 to 331495 10204 mRNA_1837: 10205 - K00281 GLDC, gcvP glycine dehydrogenase, at 331991 to 335971 10205 mRNA_1838: 10206 - K04486 E3.1.3.15B histidinol-phosphatase (PHP family), at 336405 to 337627 10206
Group Condition mRNA_1834 mRNA_1835 mRNA_1836 mRNA_1837 mRNA_1838
10202
10203
10204
10205
10206
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -1.7 -0.3 -1.1  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -1.3 -0.2 -0.9  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 -0.1 -0.9  
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -1.0 -0.0 -0.7  
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.0 -0.8  
growth on ricinoleic acid YNB Glucose 0.3 -1.0 -0.2 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.3 -0.2 -0.4  
auxotrophy YNB Glucose 0.4 -1.0 -0.4 -0.1  
growth on oleic acid YNB Glucose 0.1 -1.0 -0.1 0.1  
auxotrophy YNB Glucose 75mM Arginine 0.1 -1.1 -0.0 0.2  
growth on oleic acid YNB Oleic Acid 0.2 -0.7 -0.0 -0.2  
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.9 -0.3 0.3  
auxotrophy Dropout Complete 0.1 -0.9 -0.0 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 -0.9 0.3 -0.8  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.7 -0.2 0.2  
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.3 -0.1 -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.0 0.1 -0.5 -0.5  
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.0 -0.1 -0.2  
growth on ypd YPD -0.2 0.3 0.2 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 0.3 -0.1 -0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.5 -0.2 0.1  
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