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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1833: 10201 - Hypothetical Protein, at 322426 to 322877
10201
mRNA_1834: 10202 - Hypothetical Protein, at 323054 to 324268
10202
mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501
10203
mRNA_1836: 10204 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729, at 329163 to 331495
10204
mRNA_1837: 10205 - K00281 GLDC, gcvP glycine dehydrogenase, at 331991 to 335971
10205
Group
Condition
mRNA_1833
mRNA_1834
mRNA_1835
mRNA_1836
mRNA_1837
10201
10202
10203
10204
10205
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
-1.7
-0.3
-1.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-1.3
-0.2
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
-0.1
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
-1.0
-0.0
-0.7
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
-0.0
-0.8
growth on ricinoleic acid
YNB Glucose
0.3
-1.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.3
-0.2
-0.4
auxotrophy
YNB Glucose
0.4
-1.0
-0.4
-0.1
growth on oleic acid
YNB Glucose
0.1
-1.0
-0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-1.1
-0.0
0.2
growth on oleic acid
YNB Oleic Acid
0.2
-0.7
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.9
-0.3
0.3
auxotrophy
Dropout Complete
0.1
-0.9
-0.0
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.8
-0.9
0.3
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.7
-0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.3
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.0
0.1
-0.5
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
-0.0
-0.1
-0.2
growth on ypd
YPD
-0.2
0.3
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.3
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.5
-0.2
0.1
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