Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1820: 10188 - Hypothetical Protein, at 290979 to 291681 10188 mRNA_1821: 10189 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 291714 to 294112 10189 mRNA_1822: 10190 - KOG0627 Heat shock transcription factor, at 294810 to 296545 10190 mRNA_1823: 10191 - KOG3783 Uncharacterized conserved protein, at 298528 to 301287 10191 mRNA_1824: 10192 - Hypothetical Protein, at 301582 to 303988 10192
Group Condition mRNA_1820 mRNA_1821 mRNA_1822 mRNA_1823 mRNA_1824
10188
10189
10190
10191
10192
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.5 -0.4 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.0 -0.7 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.4 -0.5 -0.3 0.0
auxotrophy Dropout Complete 0.1 0.0 -0.4 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.2 -0.4 -0.5 -0.5
growth on oleic acid YNB Glucose -0.1 -0.0 -0.2 0.5 -0.4
growth on ypd YPD -0.1 0.3 0.0 -0.2 -0.3
growth on ricinoleic acid YNB Glucose 0.1 0.3 -0.1 0.1 -0.6
auxotrophy YNB Glucose 75mM Methionine -0.0 0.0 0.0 0.2 -0.3
auxotrophy YNB Glucose 0.2 0.1 -0.2 -0.0 -0.2
growth on oleic acid YNB Oleic Acid -0.1 0.1 0.0 0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 0.1 0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.0 -0.2 -0.1 0.4
auxotrophy YNB Glucose 75mM Arginine 0.3 0.2 -0.1 0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.0 -0.2 0.2 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 0.3 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.0 0.0 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.6 -0.2 0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 0.4 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1 0.5 -0.2 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 0.3 0.1 0.3
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