Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1819: 10187 - K09215 OSR, ODD odd-skipped, at 287876 to 290451 10187 mRNA_1820: 10188 - Hypothetical Protein, at 290979 to 291681 10188 mRNA_1821: 10189 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 291714 to 294112 10189 mRNA_1822: 10190 - KOG0627 Heat shock transcription factor, at 294810 to 296545 10190 mRNA_1823: 10191 - KOG3783 Uncharacterized conserved protein, at 298528 to 301287 10191
Group Condition mRNA_1819 mRNA_1820 mRNA_1821 mRNA_1822 mRNA_1823
10187
10188
10189
10190
10191
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.1 -0.5 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.2 -0.4 -0.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 0.0 -0.7 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.0 -0.0 -0.2 -0.1
auxotrophy Dropout Complete -0.2 0.1 0.0 -0.4 -0.3
growth on ypd YPD -0.4 -0.1 0.3 0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.4 0.2 -0.4 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 0.0 0.0 0.2
growth on oleic acid YNB Glucose -0.2 -0.1 -0.0 -0.2 0.5
auxotrophy YNB Glucose -0.1 0.2 0.1 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.1 0.1 0.0 0.3
ypd buoyancy 40 hrs High Buoyancy -0.3 0.1 -0.0 0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3 0.2 -0.1 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.3 0.0 -0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.0 0.0 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 0.1 0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 0.1 0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.0 0.0 0.4 0.1
growth on ricinoleic acid YNB Glucose 0.2 0.1 0.3 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 0.6 -0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.1 0.1 0.5 -0.2
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