Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1817: 10185 - HMMPfam-Ring finger domain-PF13639,ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966,SUPERFAMILY--SSF57850, at 285247 to 286558 10185 mRNA_1818: 10186 - Hypothetical Protein, at 286917 to 287591 10186 mRNA_1819: 10187 - K09215 OSR, ODD odd-skipped, at 287876 to 290451 10187 mRNA_1820: 10188 - Hypothetical Protein, at 290979 to 291681 10188 mRNA_1821: 10189 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 291714 to 294112 10189
Group Condition mRNA_1817 mRNA_1818 mRNA_1819 mRNA_1820 mRNA_1821
10185
10186
10187
10188
10189
auxotrophy YNB Glucose 75mM Methionine -2.4 -0.1 -0.3 -0.0 0.0
auxotrophy YNB Glucose -2.6 -0.3 -0.1 0.2 0.1
auxotrophy Dropout Complete -2.2 0.0 -0.2 0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.1 -0.9 -0.1 -0.5
auxotrophy YNB Glucose 75mM Arginine -1.9 -0.2 -0.1 0.3 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.9 -0.1 0.1 0.1 0.1
growth on oleic acid YNB Oleic Acid -1.4 -0.0 -0.1 -0.1 0.1
growth on oleic acid YNB Glucose -0.9 -0.4 -0.2 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -1.4 0.1 -0.3 0.1 -0.0
growth on ricinoleic acid YNB Glucose -1.8 -0.2 0.2 0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 0.5 0.2 0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.2 -0.3 0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.1 0.1 0.3 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.2 -0.2 -0.2 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 -0.4 -0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.5 0.0 0.0 0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.1 0.0 0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.1 0.1 0.3 -0.0
growth on ypd YPD 0.3 0.0 -0.4 -0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.1 -0.1 0.2 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.1 0.0 0.4 0.2
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