Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1815: 10183 - K20777 EXD2 exonuclease 3'-5' domain-containing protein 2, at 280165 to 281761 10183 mRNA_1816: 10184 - K08178 JEN MFS transporter, SHS family, lactate transporter, at 282501 to 284889 10184 mRNA_1817: 10185 - HMMPfam-Ring finger domain-PF13639,ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966,SUPERFAMILY--SSF57850, at 285247 to 286558 10185 mRNA_1818: 10186 - Hypothetical Protein, at 286917 to 287591 10186 mRNA_1819: 10187 - K09215 OSR, ODD odd-skipped, at 287876 to 290451 10187
Group Condition mRNA_1815 mRNA_1816 mRNA_1817 mRNA_1818 mRNA_1819
10183
10184
10185
10186
10187
auxotrophy YNB Glucose 0.1 0.4 -2.6 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.4 0.3 -2.4 -0.1 -0.3
growth on oleic acid YNB Oleic Acid 0.0 -0.3 -1.4 -0.0 -0.1
auxotrophy Dropout Complete 0.3 0.3 -2.2 0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 -1.4 0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.3 0.3 -1.9 -0.2 -0.1
growth on oleic acid YNB Glucose 0.3 -0.3 -0.9 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.1 -1.9 -0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.0 -0.7 -0.1 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.4 -1.7 0.5 0.2
growth on ricinoleic acid YNB Glucose 0.5 0.2 -1.8 -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.4 -0.4 0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.2 -0.0 -0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 -0.4 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.0 -0.5 0.0 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.1 -0.9 -0.1 0.1
growth on ypd YPD 0.2 -0.4 0.3 0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 -0.3 -0.4 0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.1 0.1 -0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.2 -0.4 0.1 0.1
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