Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1808: 10176 - Hypothetical Protein, at 257395 to 258066 10176 mRNA_1809: 10177 - Hypothetical Protein, at 258844 to 259797 10177 mRNA_1810: 10178 - HMMPfam-Predicted SAM-dependent RNA methyltransferase-PF04252, at 260255 to 261213 10178 mRNA_1811: 10179 - HMMPfam-Centrosome microtubule-binding domain of Cep57-PF06657, at 261573 to 264889 10179 mRNA_1812: 10180 - Hypothetical Protein, at 265152 to 268202 10180
Group Condition mRNA_1808 mRNA_1809 mRNA_1810 mRNA_1811 mRNA_1812
10176
10177
10178
10179
10180
growth on ricinoleic acid YNB Ricinoleic Acid -0.8   0.3 -0.8 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2   -0.0 -0.5 -0.2
growth on oleic acid YNB Oleic Acid -0.1   -0.3 -0.1 -0.3
growth on oleic acid YNB Glucose -0.6   -0.1 -0.2 0.1
growth on ricinoleic acid YNB Glucose -0.3   -0.1 -0.5 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0   0.1 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6   -0.3 -0.8 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.2   -0.1 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7   -0.4 -0.7 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.1 0.0 -0.0
growth on ypd YPD -0.5   -0.1 0.6 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8   -0.1 -0.9 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.2 -0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1   0.3 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.5   -0.5 0.3 -0.0
auxotrophy YNB Glucose -0.2   0.2 0.8 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.6   0.1 0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.2   -0.2 -0.4 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   -0.0 0.6 -0.0
auxotrophy Dropout Complete 0.4   0.2 0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 1.1   -0.3 0.2 -0.1
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