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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1805: 10173 - K00616 E2.2.1.2, talA, talB transaldolase, at 244188 to 245888
10173
mRNA_1806: 10174 - BLAST related to C2H2 zinc finger protein [Ustilago hordei], at 246478 to 247533
10174
mRNA_1807: 10175 - K09403 FOXJ2_3 forkhead box protein J2/3, at 251136 to 255270
10175
mRNA_1808: 10176 - Hypothetical Protein, at 257395 to 258066
10176
mRNA_1809: 10177 - Hypothetical Protein, at 258844 to 259797
10177
Group
Condition
mRNA_1805
mRNA_1806
mRNA_1807
mRNA_1808
mRNA_1809
10173
10174
10175
10176
10177
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.8
0.0
0.2
growth on ypd
YPD
0.1
-0.2
-0.5
auxotrophy
YNB Glucose
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.2
growth on oleic acid
YNB Glucose
0.7
-0.3
-0.6
growth on oleic acid
YNB Oleic Acid
0.3
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.2
1.1
growth on ricinoleic acid
YNB Glucose
0.9
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.1
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.9
0.2
1.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.2
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.2
0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.2
0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
1.4
0.1
-0.8
auxotrophy
YNB Glucose 75mM Methionine
1.1
-0.2
-0.1
auxotrophy
Dropout Complete
0.9
-0.2
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
1.0
-0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.9
-0.3
0.6
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