Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1801: 10169 - HMMPfam-Survival motor neuron (SMN) interacting protein 1 (SIP1)-PF04938, at 231185 to 232547 10169 mRNA_1802: 10170 - K05546 GANAB alpha 1,3-glucosidase, at 232622 to 238014 10170 mRNA_1803: 10171 - K15205 TFC6 transcription factor C subunit 6, at 238307 to 241610 10171 mRNA_1804: 10172 - Hypothetical Protein, at 241788 to 243277 10172 mRNA_1805: 10173 - K00616 E2.2.1.2, talA, talB transaldolase, at 244188 to 245888 10173
Group Condition mRNA_1801 mRNA_1802 mRNA_1803 mRNA_1804 mRNA_1805
10169
10170
10171
10172
10173
auxotrophy Dropout Complete   -0.7   -1.2  
growth on ricinoleic acid YNB Ricinoleic Acid   -1.1   -0.7  
auxotrophy YNB Glucose 75mM Methionine   -0.6   -1.1  
auxotrophy YNB Glucose   -0.8   -0.7  
auxotrophy YNB Glucose 75mM Arginine   -0.6   -0.9  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.4   -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation   0.8   -1.4  
growth on oleic acid YNB Glucose   -0.3   -0.2  
growth on ricinoleic acid YNB Glucose   -0.9   0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.8   0.4  
ypd buoyancy 40 hrs High Buoyancy   -0.1   -0.1  
facs on lipid accumulation Sorted High BODIPY Gate   -0.5   0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1   0.0  
ypd buoyancy 40 hrs Median Buoyancy   -0.0   0.2  
facs on lipid accumulation Sorted Low BODIPY Gate   0.5   -0.3  
facs on lipid accumulation Sorted No BODIPY Gate   0.2   0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.6   0.9  
growth on oleic acid YNB Oleic Acid   -0.3   0.7  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2   0.4  
ypd buoyancy 40 hrs Low Buoyancy   0.7   -0.1  
growth on ypd YPD   0.1   1.6  
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