Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1800: 10168 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 229665 to 231047 10168 mRNA_1801: 10169 - HMMPfam-Survival motor neuron (SMN) interacting protein 1 (SIP1)-PF04938, at 231185 to 232547 10169 mRNA_1802: 10170 - K05546 GANAB alpha 1,3-glucosidase, at 232622 to 238014 10170 mRNA_1803: 10171 - K15205 TFC6 transcription factor C subunit 6, at 238307 to 241610 10171 mRNA_1804: 10172 - Hypothetical Protein, at 241788 to 243277 10172
Group Condition mRNA_1800 mRNA_1801 mRNA_1802 mRNA_1803 mRNA_1804
10168
10169
10170
10171
10172
auxotrophy Dropout Complete 0.0   -0.7   -1.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   -1.1   -0.7
auxotrophy YNB Glucose 0.1   -0.8   -0.7
auxotrophy YNB Glucose 75mM Methionine 0.3   -0.6   -1.1
auxotrophy YNB Glucose 75mM Arginine 0.1   -0.6   -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0   -0.4   -0.3
growth on oleic acid YNB Glucose -0.1   -0.3   -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1   0.8   -1.4
growth on ricinoleic acid YNB Glucose 0.0   -0.9   0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   -0.8   0.4
ypd buoyancy 40 hrs High Buoyancy 0.0   -0.1   -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0   -0.5   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3   -0.6   0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   -0.1   0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   0.5   -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1   -0.0   0.2
growth on oleic acid YNB Oleic Acid -0.2   -0.3   0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.1   0.2   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0   0.2   0.4
ypd buoyancy 40 hrs Low Buoyancy 0.2   0.7   -0.1
growth on ypd YPD -0.2   0.1   1.6
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