Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1796: 10164 - K10878 SPO11 meiotic recombination protein SPO11, at 219619 to 222270 10164 mRNA_1797: 10165 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 222381 to 224884 10165 mRNA_1798: 10166 - KOG0725 Reductases with broad range of substrate specificities, at 225398 to 226777 10166 mRNA_1799: 10167 - KOG2489 Transmembrane protein, at 226927 to 229515 10167 mRNA_1800: 10168 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 229665 to 231047 10168
Group Condition mRNA_1796 mRNA_1797 mRNA_1798 mRNA_1799 mRNA_1800
10164
10165
10166
10167
10168
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.6 -0.3 -0.3 0.2
auxotrophy Dropout Complete -0.7 -0.3 -0.6 -0.2 0.0
growth on oleic acid YNB Glucose -1.0 -0.0 0.0 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.5 -0.4 0.0 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.5 -0.1 -0.4 0.3
growth on ricinoleic acid YNB Glucose -0.7 -0.3 -0.1 -0.2 0.0
auxotrophy YNB Glucose 75mM Arginine -0.9 -0.1 -0.2 -0.1 0.1
auxotrophy YNB Glucose -0.4 -0.1 -0.2 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.2 -0.2 0.0 0.3
growth on ypd YPD 0.2 0.2 -0.4 0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 0.3 -0.1 -0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.1 -0.1 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.5 -0.3 0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.3 -0.1 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.9 0.0 -0.1 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 0.2 -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.0 0.1 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.4 0.3 -0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.1 0.4 -0.2 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 -0.1 -0.1 -0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 0.1 0.1 -0.1 -0.0
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