Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1788: 10156 - K16368 DGK1 diacylglycerol kinase (CTP), at 208859 to 210446 10156 mRNA_1789: 10157 - K10573 UBE2A, UBC2, RAD6A ubiquitin-conjugating enzyme E2 A, at 210969 to 211922 10157 mRNA_1790: 10158 - Hypothetical Protein, at 212184 to 213881 10158 mRNA_1791: 10159 - Hypothetical Protein, at 214130 to 214450 10159 mRNA_1792: 10160 - Hypothetical Protein, at 214724 to 215217 10160
Group Condition mRNA_1788 mRNA_1789 mRNA_1790 mRNA_1791 mRNA_1792
10156
10157
10158
10159
10160
auxotrophy Dropout Complete -1.4   0.3 -0.1 0.0
auxotrophy YNB Glucose 75mM Arginine -1.4   0.6 -0.1 0.0
auxotrophy YNB Glucose 75mM Methionine -1.3   0.4 -0.0 0.2
growth on oleic acid YNB Glucose -0.8   -0.3 0.2 0.1
growth on ricinoleic acid YNB Glucose -0.9   0.1 -0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.4   0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8   0.2 0.3 -0.2
auxotrophy YNB Glucose -0.9   0.5 -0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.0   0.3 0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   0.1 0.2 -0.6
growth on ypd YPD -0.8   0.4 -0.1 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4   0.1 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.0 0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1   -0.1 0.0 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.0 0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.5   -0.0 0.4 0.4
growth on oleic acid YNB Oleic Acid -0.3   0.1 0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4   0.3 -0.0 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   -0.1 0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0   0.1 0.4 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 1.2   -0.2 -0.2 0.3
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