Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1770: 10138 - HMMPfam-F-box-like-PF12937, at 161532 to 163380 10138 mRNA_1771: 10139 - K14312 NUP155, NUP170, NUP157 nuclear pore complex protein Nup155, at 163525 to 168544 10139 mRNA_1772: 10140 - K01480 speB agmatinase, at 169490 to 170600 10140 mRNA_1773: 10141 - Hypothetical Protein, at 171350 to 172928 10141 mRNA_1774: 10142 - Hypothetical Protein, at 173181 to 173906 10142
Group Condition mRNA_1770 mRNA_1771 mRNA_1772 mRNA_1773 mRNA_1774
10138
10139
10140
10141
10142
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7   -0.2 -0.3 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0   -0.2 0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.5   -0.0 -0.5 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5   0.3 0.3 -0.3
growth on oleic acid YNB Oleic Acid 0.1   -0.3 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy -0.2   -0.1 0.1 0.1
auxotrophy Dropout Complete 0.0   0.0 -0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   -0.0 -0.1 -0.0
growth on oleic acid YNB Glucose 0.1   0.1 0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.5   -0.3 0.3 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1   0.3 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.5   0.2 -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0   0.1 0.2 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1   -0.2 0.3 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5   0.3 0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.1 0.1 0.3
auxotrophy YNB Glucose -0.1   0.4 0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0   0.0 0.3 0.5
growth on ypd YPD 0.3   0.1 0.0 0.5
growth on ricinoleic acid YNB Glucose 0.6   0.3 0.1 0.0
auxotrophy YNB Glucose 75mM Methionine 0.2   0.5 0.5 -0.1
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