Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1768: 10136 - K01858 INO1, ISYNA1 myo-inositol-1-phosphate synthase, at 156346 to 158351 10136 mRNA_1769: 10137 - Interpro F-box-like 0, at 159108 to 161176 10137 mRNA_1770: 10138 - HMMPfam-F-box-like-PF12937, at 161532 to 163380 10138 mRNA_1771: 10139 - K14312 NUP155, NUP170, NUP157 nuclear pore complex protein Nup155, at 163525 to 168544 10139 mRNA_1772: 10140 - K01480 speB agmatinase, at 169490 to 170600 10140
Group Condition mRNA_1768 mRNA_1769 mRNA_1770 mRNA_1771 mRNA_1772
10136
10137
10138
10139
10140
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 0.2 -0.7   -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.1 0.3 -0.5   0.3
auxotrophy Dropout Complete -0.7 -0.1 0.0   0.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 -0.1 0.5   -0.0
growth on oleic acid YNB Oleic Acid -0.3 -0.1 0.1   -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 -0.2   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.1 -0.0   -0.2
growth on oleic acid YNB Glucose -0.4 -0.1 0.1   0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 0.0 -0.1   0.3
growth on ypd YPD -0.5 0.1 0.3   0.1
auxotrophy YNB Glucose -0.4 0.1 -0.1   0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.1 0.1   -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2 -0.0   0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.2 0.3   -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.0 0.5   0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 -0.0   0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 0.2 0.2   0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.1 0.2   0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.0 0.5   0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.2 0.5   -0.3
growth on ricinoleic acid YNB Glucose -0.1 0.1 0.6   0.3
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