Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1764: 10132 - KOG0867 Glutathione S-transferase, at 147844 to 149167 10132 mRNA_1765: 10133 - HMMPfam-FUN14 family-PF04930, at 149374 to 150218 10133 mRNA_1766: 10134 - K03097 CSNK2A casein kinase II subunit alpha, at 151982 to 154408 10134 mRNA_1767: 10135 - HMMPfam-F-box-like-PF12937, at 154773 to 156142 10135 mRNA_1768: 10136 - K01858 INO1, ISYNA1 myo-inositol-1-phosphate synthase, at 156346 to 158351 10136
Group Condition mRNA_1764 mRNA_1765 mRNA_1766 mRNA_1767 mRNA_1768
10132
10133
10134
10135
10136
growth on ypd YPD -0.1 -0.3 -0.1 -0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.5 -0.4 0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.9 0.5 -0.2 0.0
growth on oleic acid YNB Oleic Acid 0.3 0.1 -0.1 -0.5 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.9 -0.3 0.7 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.4 0.1 0.3 -1.0
ypd buoyancy 40 hrs High Buoyancy -0.3 0.2 -0.4 0.3 -0.2
growth on oleic acid YNB Glucose 0.6 -0.2 0.1 -0.4 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.0 -0.1 0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.2 -0.3 0.5 -0.6
auxotrophy Dropout Complete 0.3 -0.1 0.3 -0.0 -0.7
growth on ricinoleic acid YNB Glucose 0.0 -0.1 -0.1 0.2 -0.1
auxotrophy YNB Glucose 0.5 -0.4 0.1 0.5 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.2 0.3 0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.0 -0.1 0.4 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 0.7 1.0 -0.6
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.4 -0.2 0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.3 0.5 0.8 -1.1
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.2 0.5 0.7 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.5 0.4 0.7 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.3 0.5 0.6 -0.2
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