Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1757: 10125 - KOG1426 FOG RCC1 domain, at 126348 to 129051 10125 mRNA_1758: 10126 - KOG2998 Uncharacterized conserved protein, at 129758 to 131068 10126 mRNA_1759: 10127 - K13345 PEX12, PAF3 peroxin-12, at 132751 to 134282 10127 mRNA_1760: 10128 - KOG0940 Ubiquitin protein ligase RSP5/NEDD4, at 134712 to 138303 10128 mRNA_1761: 10129 - K07189 PPP1R3 protein phosphatase 1 regulatory subunit 3A/B/C/D/E, at 141827 to 142144 10129
Group Condition mRNA_1757 mRNA_1758 mRNA_1759 mRNA_1760 mRNA_1761
10125
10126
10127
10128
10129
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -1.7   0.1 -1.6
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.0   0.2 -0.8
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.4   -0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1   0.3 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.7   -0.3 -1.1
growth on oleic acid YNB Glucose -0.2 0.0   0.1 -0.2
auxotrophy Dropout Complete -0.3 -0.6   0.2 0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4   0.0 0.3
auxotrophy YNB Glucose -0.1 -0.3   -0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1   0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.4   0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3   -0.1 0.6
growth on oleic acid YNB Oleic Acid 0.1 -0.1   0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.4   -0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.4   0.2 -0.2
growth on ypd YPD 0.3 -0.2   0.2 0.5
growth on ricinoleic acid YNB Glucose -0.0 0.5   0.5 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.3   0.1 1.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.8   0.1 0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.5   -0.1 1.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2   0.3 1.8
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