Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1756: 10124 - KOG2821 RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin A, at 124866 to 126194 10124 mRNA_1757: 10125 - KOG1426 FOG RCC1 domain, at 126348 to 129051 10125 mRNA_1758: 10126 - KOG2998 Uncharacterized conserved protein, at 129758 to 131068 10126 mRNA_1759: 10127 - K13345 PEX12, PAF3 peroxin-12, at 132751 to 134282 10127 mRNA_1760: 10128 - KOG0940 Ubiquitin protein ligase RSP5/NEDD4, at 134712 to 138303 10128
Group Condition mRNA_1756 mRNA_1757 mRNA_1758 mRNA_1759 mRNA_1760
10124
10125
10126
10127
10128
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.1 -1.7   0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 0.1 -0.4   -0.4
auxotrophy Dropout Complete 0.2 -0.3 -0.6   0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 -0.4   0.0
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 -0.3   -0.1
auxotrophy YNB Glucose 0.1 -0.1 -0.3   -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.3 0.5   -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.1   0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 0.4   -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 0.0   0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.1 -0.1   0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.0 0.3   0.1
growth on oleic acid YNB Glucose 0.3 -0.2 0.0   0.1
growth on oleic acid YNB Oleic Acid 0.0 0.1 -0.1   0.2
growth on ypd YPD -0.1 0.3 -0.2   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.0 0.4   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 0.2   0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.2 0.4   0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.1 0.7   -0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.0 0.5   0.5
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.2 0.8   0.1
remove
mRNA_1756
plot		 remove
mRNA_1757
plot		 remove
mRNA_1758		 remove
mRNA_1759
plot		 remove
mRNA_1760
plot