Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1755: 10123 - K00326 E1.6.2.2 cytochrome-b5 reductase, at 123629 to 124708 10123 mRNA_1756: 10124 - KOG2821 RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin A, at 124866 to 126194 10124 mRNA_1757: 10125 - KOG1426 FOG RCC1 domain, at 126348 to 129051 10125 mRNA_1758: 10126 - KOG2998 Uncharacterized conserved protein, at 129758 to 131068 10126 mRNA_1759: 10127 - K13345 PEX12, PAF3 peroxin-12, at 132751 to 134282 10127
Group Condition mRNA_1755 mRNA_1756 mRNA_1757 mRNA_1758 mRNA_1759
10123
10124
10125
10126
10127
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.4 0.1 -1.7  
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.3 0.1 -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation -1.5 0.2 0.1 0.7  
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.3 -0.1 0.4  
facs on lipid accumulation Sorted No BODIPY Gate 0.5 -0.1 -0.2 0.0  
growth on ypd YPD 0.3 -0.1 0.3 -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 -0.2 -0.0 0.3  
facs on lipid accumulation Sorted High BODIPY Gate 1.1 -0.1 -0.3 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 -0.3 -0.3 0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.1 -0.1 0.2  
auxotrophy Dropout Complete 1.8 0.2 -0.3 -0.6  
auxotrophy YNB Glucose 75mM Methionine 1.6 0.1 -0.1 -0.4  
auxotrophy YNB Glucose 75mM Arginine 1.6 0.1 -0.1 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 0.0 0.2 0.4  
auxotrophy YNB Glucose 1.8 0.1 -0.1 -0.3  
growth on oleic acid YNB Glucose 1.4 0.3 -0.2 0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.6 0.1 0.2 0.8  
growth on oleic acid YNB Oleic Acid 2.2 0.0 0.1 -0.1  
growth on ricinoleic acid YNB Glucose 2.3 -0.2 -0.0 0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid 3.4 -0.3 0.0 0.4  
growth on ricinoleic acid YNB Ricinoleic Acid 4.4 -0.0 -0.1 -0.1  
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