Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1744: 10112 - Hypothetical Protein, at 100843 to 102379 10112 mRNA_1745: 10113 - K09829 ERG2 C-8 sterol isomerase, at 102817 to 103817 10113 mRNA_1746: 10114 - KOG2897 DNA-binding protein YL1 and related proteins, at 104226 to 106402 10114 mRNA_1747: 10115 - Hypothetical Protein, at 106989 to 107598 10115 mRNA_1748: 10116 - HMMPfam-Oxidoreductase family, NAD-binding Rossmann fold-PF01408,HMMPfam-Putative oxidoreductase C terminal-PF08635,SUPERFAMILY--SSF51735,SUPERFAMILY--SSF55347, at 108076 to 110507 10116
Group Condition mRNA_1744 mRNA_1745 mRNA_1746 mRNA_1747 mRNA_1748
10112
10113
10114
10115
10116
ypd buoyancy 40 hrs No Buoyancy Separation -0.3   0.9 -4.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3   -0.7 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   -0.6 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0   -0.4 -0.2 -0.1
auxotrophy YNB Glucose -0.2   -0.6 -0.2 0.3
auxotrophy Dropout Complete -0.2   -0.2 -0.5 0.3
auxotrophy YNB Glucose 75mM Arginine 0.4   -1.0 0.2 0.0
growth on ypd YPD -0.1   -0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0   -0.6 0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2   -0.5 0.7 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.0 0.0 0.0
growth on ricinoleic acid YNB Glucose 0.4   -0.5 0.1 0.3
growth on oleic acid YNB Oleic Acid 0.1   -0.1 0.2 0.2
growth on oleic acid YNB Glucose -0.3   0.4 0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.4   -0.2 0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3   0.5 0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -0.0 0.7 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6   -0.2 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3   -0.1 0.4 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.4   0.5 0.4 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0   0.9 0.7 0.3
remove
mRNA_1744
plot		 remove
mRNA_1745
plot		 remove
mRNA_1746		 remove
mRNA_1747
plot		 remove
mRNA_1748
plot