Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1734: 10102 - KOG1721 FOG Zn-finger, at 67947 to 72087 10102 mRNA_1735: 10103 - K03235 EF3, TEF3 elongation factor 3, at 73051 to 76843 10103 mRNA_1736: 10104 - K01593 DDC aromatic-L-amino-acid decarboxylase, at 78147 to 80608 10104 mRNA_1737: 10105 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 80884 to 82688 10105 mRNA_1738: 10106 - Hypothetical Protein, at 82841 to 84052 10106
Group Condition mRNA_1734 mRNA_1735 mRNA_1736 mRNA_1737 mRNA_1738
10102
10103
10104
10105
10106
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   -0.2 -0.4 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0   -0.2 -0.3 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   0.1 0.3 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.4   -0.2 -0.3 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.8   -0.0 0.1 0.2
ypd buoyancy 40 hrs High Buoyancy -0.0   0.1 -0.1 -0.4
growth on oleic acid YNB Oleic Acid 0.0   -0.1 -0.2 -0.1
growth on ypd YPD 0.2   -0.0 0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -0.2 -0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0   0.3 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.2 -0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.3   -0.0 0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1   0.3 0.0 -0.2
growth on oleic acid YNB Glucose 0.0   -0.0 0.1 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3   -0.1 0.2 0.1
auxotrophy YNB Glucose 0.2   0.1 0.1 0.0
auxotrophy Dropout Complete 0.2   0.1 0.3 0.0
growth on ricinoleic acid YNB Glucose 0.2   -0.1 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   0.3 0.1 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   0.1 0.4 0.4
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