Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1729: 10097 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 58480 to 59986 10097 mRNA_1730: 10098 - KOG4708 Mitochondrial ribosomal protein MRP17, at 60318 to 61237 10098 mRNA_1731: 10099 - Hypothetical Protein, at 62090 to 63277 10099 mRNA_1732: 10100 - Hypothetical Protein, at 63566 to 64770 10100 mRNA_1733: 10101 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 65153 to 66958 10101
Group Condition mRNA_1729 mRNA_1730 mRNA_1731 mRNA_1732 mRNA_1733
10097
10098
10099
10100
10101
auxotrophy Dropout Complete -0.4   -0.3 -0.2 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   -1.2 -0.5 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   -0.3 -1.0 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.9   -0.1 -0.2 -0.1
growth on oleic acid YNB Glucose -0.4   0.0 -0.6 -0.3
growth on oleic acid YNB Oleic Acid -0.4   0.3 -0.8 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   -0.6 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.0   -0.6 -0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.3   -0.3 0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   0.3 -0.9 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.3   -0.3 -0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3   -0.1 -0.5 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0   -0.6 -0.2 0.1
auxotrophy YNB Glucose -0.4   0.4 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2   0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4   -0.2 -0.1 0.2
growth on ypd YPD -0.4   -0.7 0.7 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   -0.1 -0.7 0.2
auxotrophy YNB Glucose 75mM Methionine -0.2   0.4 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3   0.1 0.1 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   0.4 0.3 -0.1
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