Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_1727: 10095 - K03843 ALG2 alpha-1,3/alpha-1,6-mannosyltransferase, at 53103 to 55256
10095
mRNA_1728: 10096 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 55696 to 58007
10096
mRNA_1729: 10097 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 58480 to 59986
10097
mRNA_1730: 10098 - KOG4708 Mitochondrial ribosomal protein MRP17, at 60318 to 61237
10098
mRNA_1731: 10099 - Hypothetical Protein, at 62090 to 63277
10099
Group
Condition
mRNA_1727
mRNA_1728
mRNA_1729
mRNA_1730
mRNA_1731
10095
10096
10097
10098
10099
growth on ypd
YPD
-0.2
-0.4
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.9
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.3
-1.2
auxotrophy
Dropout Complete
-0.2
-0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.4
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.0
-0.6
growth on oleic acid
YNB Glucose
-0.3
-0.4
0.0
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.0
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.4
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
0.3
-0.3
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.1
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.2
0.4
auxotrophy
YNB Glucose
-0.1
-0.4
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.8
0.3
0.4
remove
mRNA_1727
plot
remove
mRNA_1728
plot
remove
mRNA_1729
remove
mRNA_1730
plot
remove
mRNA_1731
plot