Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1727: 10095 - K03843 ALG2 alpha-1,3/alpha-1,6-mannosyltransferase, at 53103 to 55256 10095 mRNA_1728: 10096 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 55696 to 58007 10096 mRNA_1729: 10097 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 58480 to 59986 10097 mRNA_1730: 10098 - KOG4708 Mitochondrial ribosomal protein MRP17, at 60318 to 61237 10098 mRNA_1731: 10099 - Hypothetical Protein, at 62090 to 63277 10099
Group Condition mRNA_1727 mRNA_1728 mRNA_1729 mRNA_1730 mRNA_1731
10095
10096
10097
10098
10099
growth on ypd YPD   -0.2 -0.4   -0.7
facs on lipid accumulation Sorted High BODIPY Gate   -0.0 -0.9   -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0 0.3   -1.2
auxotrophy Dropout Complete   -0.2 -0.4   -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   -0.5 -0.3   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 -0.4   -0.2
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -0.3   -0.3
auxotrophy YNB Glucose 75mM Arginine   -0.5 -0.2   0.0
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.0   -0.6
growth on oleic acid YNB Glucose   -0.3 -0.4   0.0
ypd buoyancy 40 hrs Median Buoyancy   0.0 0.0   -0.6
facs on lipid accumulation Sorted No BODIPY Gate   -0.3 -0.3   0.1
growth on oleic acid YNB Oleic Acid   -0.3 -0.4   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.1 -0.2   -0.3
growth on ricinoleic acid YNB Glucose   0.3 -0.3   -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   0.4 -0.1   -0.6
auxotrophy YNB Glucose 75mM Methionine   -0.4 -0.2   0.4
auxotrophy YNB Glucose   -0.1 -0.4   0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 -0.1   0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.5 0.3   -0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.8 0.3   0.4
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