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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1726: 10094 - BLAST Protein priA [Grifola frondosa], at 50052 to 51969
10094
mRNA_1727: 10095 - K03843 ALG2 alpha-1,3/alpha-1,6-mannosyltransferase, at 53103 to 55256
10095
mRNA_1728: 10096 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 55696 to 58007
10096
mRNA_1729: 10097 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 58480 to 59986
10097
mRNA_1730: 10098 - KOG4708 Mitochondrial ribosomal protein MRP17, at 60318 to 61237
10098
Group
Condition
mRNA_1726
mRNA_1727
mRNA_1728
mRNA_1729
mRNA_1730
10094
10095
10096
10097
10098
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.5
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.0
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.8
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.5
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.4
-0.2
growth on ypd
YPD
0.0
-0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.2
0.0
auxotrophy
YNB Glucose
0.1
-0.1
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
-0.2
-0.4
auxotrophy
Dropout Complete
0.5
-0.2
-0.4
growth on oleic acid
YNB Glucose
0.6
-0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.6
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.0
0.3
growth on oleic acid
YNB Oleic Acid
0.9
-0.3
-0.4
growth on ricinoleic acid
YNB Glucose
0.4
0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.5
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.9
0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
1.4
0.8
0.3
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