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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1724: 10092 - K08827 PRPF4B serine/threonine-protein kinase PRP4, at 43091 to 44788
10092
mRNA_1725: 10093 - KOG2343 Glucose-repressible protein and related proteins, at 46697 to 49542
10093
mRNA_1726: 10094 - BLAST Protein priA [Grifola frondosa], at 50052 to 51969
10094
mRNA_1727: 10095 - K03843 ALG2 alpha-1,3/alpha-1,6-mannosyltransferase, at 53103 to 55256
10095
mRNA_1728: 10096 - HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906, at 55696 to 58007
10096
Group
Condition
mRNA_1724
mRNA_1725
mRNA_1726
mRNA_1727
mRNA_1728
10092
10093
10094
10095
10096
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.8
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.8
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.5
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.2
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.4
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.0
-0.5
growth on ypd
YPD
0.2
0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.2
0.1
auxotrophy
YNB Glucose
0.4
0.1
-0.1
auxotrophy
Dropout Complete
0.3
0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.1
0.5
growth on oleic acid
YNB Glucose
0.4
0.6
-0.3
growth on ricinoleic acid
YNB Glucose
0.1
0.4
0.3
growth on oleic acid
YNB Oleic Acid
1.1
0.9
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
0.9
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
1.3
1.4
0.8
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