Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1719: 10087 - Hypothetical Protein, at 27838 to 28571 10087 mRNA_1720: 10088 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 29211 to 32060 10088 mRNA_1721: 10089 - K11483 HOS2 histone deacetylase HOS2, at 32428 to 34334 10089 mRNA_1722: 10090 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 34875 to 37390 10090 mRNA_1723: 10091 - KOG4157 beta-1,6-N-acetylglucosaminyltransferase, contains WSC domain, at 38655 to 42471 10091
Group Condition mRNA_1719 mRNA_1720 mRNA_1721 mRNA_1722 mRNA_1723
10087
10088
10089
10090
10091
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.1 -2.1 0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.3 -1.2 -0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 -1.0 0.0 0.1
auxotrophy Dropout Complete 0.5 -0.1 -1.1 -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.1 -0.3 -0.0 0.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1 -0.2 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 0.1 -0.1 -0.1
growth on ypd YPD -0.0 -0.1 -0.3 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 0.3 0.1 -0.1
growth on oleic acid YNB Oleic Acid 0.3 -0.3 -0.2 -0.0 -0.1
growth on oleic acid YNB Glucose 0.8 -0.1 -0.7 -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.7 -0.2 -0.7 -0.1 0.3
auxotrophy YNB Glucose 0.5 -0.0 -0.4 -0.1 0.1
growth on ricinoleic acid YNB Glucose 0.9 -0.5 -0.5 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.0 -0.1 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine 0.7 0.2 -0.7 -0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.4 0.6 0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.5 0.6 0.1 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.3 0.4 0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.9 -0.2 -0.3 0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.3 0.6 0.2 0.3
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