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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1717: 10085 - HMMPfam-Per1-like-PF04080, at 24723 to 26291
10085
mRNA_1718: 10086 - HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072, at 26598 to 27052
10086
mRNA_1719: 10087 - Hypothetical Protein, at 27838 to 28571
10087
mRNA_1720: 10088 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 29211 to 32060
10088
mRNA_1721: 10089 - K11483 HOS2 histone deacetylase HOS2, at 32428 to 34334
10089
Group
Condition
mRNA_1717
mRNA_1718
mRNA_1719
mRNA_1720
mRNA_1721
10085
10086
10087
10088
10089
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.0
-0.1
-2.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.5
0.7
-0.2
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.0
0.9
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-1.3
0.9
-0.5
-0.5
auxotrophy
Dropout Complete
-0.5
0.5
-0.1
-1.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
0.0
-0.3
-1.2
auxotrophy
YNB Glucose
-1.1
0.5
-0.0
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.5
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
-0.3
-0.2
-1.0
growth on oleic acid
YNB Glucose
-0.9
0.8
-0.1
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.8
0.2
0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.4
-0.1
-0.2
growth on ypd
YPD
-0.3
-0.0
-0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.3
-0.3
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.8
0.7
0.2
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-0.3
0.3
growth on oleic acid
YNB Oleic Acid
-0.1
0.3
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.0
-0.5
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.4
-0.3
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.0
-0.4
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.4
-0.3
0.6
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