Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_1717: 10085 - HMMPfam-Per1-like-PF04080, at 24723 to 26291 10085 mRNA_1718: 10086 - HMMPfam-Cytochrome C oxidase copper chaperone (COX17)-PF05051,SUPERFAMILY--SSF47072, at 26598 to 27052 10086 mRNA_1719: 10087 - Hypothetical Protein, at 27838 to 28571 10087 mRNA_1720: 10088 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SUPERFAMILY--SSF57667, at 29211 to 32060 10088 mRNA_1721: 10089 - K11483 HOS2 histone deacetylase HOS2, at 32428 to 34334 10089
Group Condition mRNA_1717 mRNA_1718 mRNA_1719 mRNA_1720 mRNA_1721
10085
10086
10087
10088
10089
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   0.0 -0.1 -2.1
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5   0.7 -0.2 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -2.0   0.9 -0.2 -0.3
growth on ricinoleic acid YNB Glucose -1.3   0.9 -0.5 -0.5
auxotrophy Dropout Complete -0.5   0.5 -0.1 -1.1
facs on lipid accumulation Sorted High BODIPY Gate 0.4   0.0 -0.3 -1.2
auxotrophy YNB Glucose -1.1   0.5 -0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.5 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.4   -0.3 -0.2 -1.0
growth on oleic acid YNB Glucose -0.9   0.8 -0.1 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.8   0.2 0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0   -0.4 -0.1 -0.2
growth on ypd YPD -0.3   -0.0 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.3 -0.3 0.1
auxotrophy YNB Glucose 75mM Methionine -0.8   0.7 0.2 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -0.4 -0.3 0.3
growth on oleic acid YNB Oleic Acid -0.1   0.3 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -0.0 -0.5 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1   0.4 -0.3 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   -0.0 -0.4 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4   0.4 -0.3 0.6
remove
mRNA_1717
plot
remove
mRNA_1718
plot
remove
mRNA_1719
remove
mRNA_1720
plot
remove
mRNA_1721
plot